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Registro completo
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Biblioteca (s) : |
INIA Treinta y Tres. |
Fecha : |
12/09/2014 |
Actualizado : |
08/10/2019 |
Tipo de producción científica : |
Artículos en Revistas Indexadas Internacionales |
Autor : |
FITZGERALD, M.A.; BERGMAN, C.J.; RESURRECCION, A.P.; MOLLER, J.; JIMENEZ, R.; REINKE, R.F.; MARTIN, M.; BLANCO, P.; MOLINA, F.; CHEN, M.-H.; KURI, V.; ROMERO, M.V.; HABIBI, F.; UMEMOTO, T.; JONGDEE, S.; GRATEROL, E.; REDDY, K.R.; BASSINELLO, P.Z.; SIVAKAMI, R.; RANI, N.S.; DAS, S.; WANG, Y.J.; INDRASARI, S.D.; RAMLI, A.; AHMAD, R.; DIPTI, S.S.; XIE, L.; LANG, N.T.; SINGH, P.; PORO, D.C.; TAVASOLI, F.; MESTRES, C. |
Afiliación : |
BLANCO BARRAL, PEDRO HORACIO, Instituto Nacional de Investigación Agropecuaria (INIA), Uruguay; MOLINA CASELLA, FEDERICO, Instituto Nacional de Investigación Agropecuaria (INIA), Uruguay. |
Título : |
Addressing the dilemmas of measuring amylose in rice. |
Fecha de publicación : |
2009 |
Fuente / Imprenta : |
Cereal Chemistry, 2009, v. 86, no. 5, p. 492-498. |
ISSN : |
0009-0352 |
DOI : |
10.1094/CCHEM-86-5-0492 |
Idioma : |
Inglés |
Contenido : |
Amylose content is a parameter that correlates with the cooking behavior of rice. It is measured at the earliest possible stages of rice improvement programs to enable breeders to build the foundations of appropriate grain quality during cultivar development. Amylose is usually quantified by absorbance of the amylose-iodine complex. The International Network for Quality Rice (INQR) conducted a survey to determine ways that amylose is measured, reproducibility between laboratories, and sources of variation. Each laboratory measured the amylose content of a set of 17 cultivars of rice. The study shows that five different versions of the iodine binding method are in use. The data show that repeatability was high within laboratories but reproducibility between laboratories was low. The major sources of variability were the way the standard curve was constructed and the iodine binding capacity of the potato amylose used to produce the standard. Reproducibility is much lower between laboratories using a standard curve of potato amylose alone compared with those using calibrated rice cultivars. This study highlights the need to standardize the way amylose is measured, and presents research avenues for doing so. |
Thesagro : |
AMILOSA; ARROZ; CALIDAD CULINARIA. |
Asunto categoría : |
F30 Genética vegetal y fitomejoramiento |
Marc : |
LEADER 02591naa a2200553 a 4500 001 1050218 005 2019-10-08 008 2009 bl uuuu u00u1 u #d 022 $a0009-0352 024 7 $a10.1094/CCHEM-86-5-0492$2DOI 100 1 $aFITZGERALD, M.A. 245 $aAddressing the dilemmas of measuring amylose in rice.$h[electronic resource] 260 $c2009 520 $aAmylose content is a parameter that correlates with the cooking behavior of rice. It is measured at the earliest possible stages of rice improvement programs to enable breeders to build the foundations of appropriate grain quality during cultivar development. Amylose is usually quantified by absorbance of the amylose-iodine complex. The International Network for Quality Rice (INQR) conducted a survey to determine ways that amylose is measured, reproducibility between laboratories, and sources of variation. Each laboratory measured the amylose content of a set of 17 cultivars of rice. The study shows that five different versions of the iodine binding method are in use. The data show that repeatability was high within laboratories but reproducibility between laboratories was low. The major sources of variability were the way the standard curve was constructed and the iodine binding capacity of the potato amylose used to produce the standard. Reproducibility is much lower between laboratories using a standard curve of potato amylose alone compared with those using calibrated rice cultivars. This study highlights the need to standardize the way amylose is measured, and presents research avenues for doing so. 650 $aAMILOSA 650 $aARROZ 650 $aCALIDAD CULINARIA 700 1 $aBERGMAN, C.J. 700 1 $aRESURRECCION, A.P. 700 1 $aMOLLER, J. 700 1 $aJIMENEZ, R. 700 1 $aREINKE, R.F. 700 1 $aMARTIN, M. 700 1 $aBLANCO, P. 700 1 $aMOLINA, F. 700 1 $aCHEN, M.-H. 700 1 $aKURI, V. 700 1 $aROMERO, M.V. 700 1 $aHABIBI, F. 700 1 $aUMEMOTO, T. 700 1 $aJONGDEE, S. 700 1 $aGRATEROL, E. 700 1 $aREDDY, K.R. 700 1 $aBASSINELLO, P.Z. 700 1 $aSIVAKAMI, R. 700 1 $aRANI, N.S. 700 1 $aDAS, S. 700 1 $aWANG, Y.J. 700 1 $aINDRASARI, S.D. 700 1 $aRAMLI, A. 700 1 $aAHMAD, R. 700 1 $aDIPTI, S.S. 700 1 $aXIE, L. 700 1 $aLANG, N.T. 700 1 $aSINGH, P. 700 1 $aPORO, D.C. 700 1 $aTAVASOLI, F. 700 1 $aMESTRES, C. 773 $tCereal Chemistry, 2009$gv. 86, no. 5, p. 492-498.
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INIA Treinta y Tres (TT) |
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Registro completo
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Biblioteca (s) : |
INIA Las Brujas. |
Fecha actual : |
08/03/2023 |
Actualizado : |
15/03/2023 |
Tipo de producción científica : |
Artículos en Revistas Indexadas Internacionales |
Circulación / Nivel : |
Internacional - -- |
Autor : |
RAMOS, Z.; GARRICK , D. J.; BLAIR, H. T.; VERA, B.; CIAPPESONI, G.; KENYON, P. R. |
Afiliación : |
ZULLY MARGOT RAMOS ALVEZ, School of Agriculture and Environment, Massey University, Palmerston North 4410, New Zealand; DORIAN J. GARRICK, School of Agriculture and Environment, Massey University, Palmerston North 4410, New Zealand; HUGH T. BLAIR, School of Agriculture and Environment, Massey University, Palmerston North 4410, New Zealand; BRENDA VERA, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay; CARLOS GABRIEL CIAPPESONI SCARONE, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay; PAUL R. KENYON, School of Agriculture and Environment, Massey University, Palmerston North 4410, New Zealand. |
Título : |
Genomic regions associated with wool, growth and reproduction traits in Uruguayan Merino Sheep. |
Fecha de publicación : |
2023 |
Fuente / Imprenta : |
Genes, 2023, volume 14, issue 1, article 167. OPEN ACCESS. doi: https://doi.org/10.3390/genes14010167 |
ISSN : |
2073-4425 |
DOI : |
10.3390/genes14010167 |
Idioma : |
Inglés |
Notas : |
Article history: Received 13 December 2022; Revised 29 December 2022; Accepted 4 January 2023; Published 7 January 2023. -- Correspondence author: Zully Ramos, email: z.ramosalvez@massey.ac.nz -- Academic Editor: Qiuyue Liu -- This article belongs to the Section Animal Genetics and Genomics (https://www.mdpi.com/journal/genes/sections/Animal_Genetics_Genomics ) -- FUNDING: his research was funded by the Regional Consortium for Innovation in Ultrafine Wool (CRILU), the European Union?s Horizon 2020 research and innovation program under the grant agreement n°772787 (Smarter) and the National Institute of Agricultural Research of Uruguay (INIA_CL_38: Rumiar). This study was supported by two Ph.D. scholarships (from the National Agency for Investigation and Innovation of Uruguay, ANII, and Massey University, New Zealand), awarded to Zully Ramos. -- LICENSSE: Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). --
Supplementary Materials The following supporting information can be downloaded at: https://www.mdpi.com/article/10.3390/genes14010167/s1, Table S1: Enrichment analysis. |
Contenido : |
The aim of this study was to identify genomic regions and genes associated with the fiber diameter (FD), clean fleece weight (CFW), live weight (LW), body condition score (BCS), pregnancy rate (PR) and lambing potential (LP) of Uruguayan Merino sheep. Phenotypic records of approximately 2000 mixed-age ewes were obtained from a Merino nucleus flock. Genome-wide association studies were performed utilizing single-step Bayesian analysis. For wool traits, a total of 35 genomic windows surpassed the significance threshold (PVE > 0.25%). The proportion of the total additive genetic variance explained by those windows was 4.85 and 9.06% for FD and CFW, respectively. There were 42 windows significantly associated with LWM, which collectively explained 43.2% of the additive genetic variance. For BCS, 22 relevant windows accounted for more than 40% of the additive genetic variance, whereas for the reproduction traits, 53 genomic windows (24 and 29 for PR and LP, respectively) reached the suggestive threshold of 0.25% of the PVE. Within the top 10 windows for each trait, we identified several genes showing potential associations with the wool (e.g., IGF-1, TGFB2R, PRKCA), live weight (e.g., CAST, LAP3, MED28, HERC6), body condition score (e.g., CDH10, TMC2, SIRPA, CPXM1) or reproduction traits (e.g., ADCY1, LEPR, GHR, LPAR2) of the mixed-age ewes. Copyright: © 2023 by the authors |
Palabras claves : |
Body condition score; Fiber diameter; Gene; GWAS; Reproduction; Sheep. |
Asunto categoría : |
L10 Genética y mejoramiento animal |
URL : |
https://www.mdpi.com/2073-4425/14/1/167/pdf
|
Marc : |
LEADER 03484naa a2200289 a 4500 001 1063971 005 2023-03-15 008 2023 bl uuuu u00u1 u #d 022 $a2073-4425 024 7 $a10.3390/genes14010167$2DOI 100 1 $aRAMOS, Z. 245 $aGenomic regions associated with wool, growth and reproduction traits in Uruguayan Merino Sheep.$h[electronic resource] 260 $c2023 500 $aArticle history: Received 13 December 2022; Revised 29 December 2022; Accepted 4 January 2023; Published 7 January 2023. -- Correspondence author: Zully Ramos, email: z.ramosalvez@massey.ac.nz -- Academic Editor: Qiuyue Liu -- This article belongs to the Section Animal Genetics and Genomics (https://www.mdpi.com/journal/genes/sections/Animal_Genetics_Genomics ) -- FUNDING: his research was funded by the Regional Consortium for Innovation in Ultrafine Wool (CRILU), the European Union?s Horizon 2020 research and innovation program under the grant agreement n°772787 (Smarter) and the National Institute of Agricultural Research of Uruguay (INIA_CL_38: Rumiar). This study was supported by two Ph.D. scholarships (from the National Agency for Investigation and Innovation of Uruguay, ANII, and Massey University, New Zealand), awarded to Zully Ramos. -- LICENSSE: Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). -- Supplementary Materials The following supporting information can be downloaded at: https://www.mdpi.com/article/10.3390/genes14010167/s1, Table S1: Enrichment analysis. 520 $aThe aim of this study was to identify genomic regions and genes associated with the fiber diameter (FD), clean fleece weight (CFW), live weight (LW), body condition score (BCS), pregnancy rate (PR) and lambing potential (LP) of Uruguayan Merino sheep. Phenotypic records of approximately 2000 mixed-age ewes were obtained from a Merino nucleus flock. Genome-wide association studies were performed utilizing single-step Bayesian analysis. For wool traits, a total of 35 genomic windows surpassed the significance threshold (PVE > 0.25%). The proportion of the total additive genetic variance explained by those windows was 4.85 and 9.06% for FD and CFW, respectively. There were 42 windows significantly associated with LWM, which collectively explained 43.2% of the additive genetic variance. For BCS, 22 relevant windows accounted for more than 40% of the additive genetic variance, whereas for the reproduction traits, 53 genomic windows (24 and 29 for PR and LP, respectively) reached the suggestive threshold of 0.25% of the PVE. Within the top 10 windows for each trait, we identified several genes showing potential associations with the wool (e.g., IGF-1, TGFB2R, PRKCA), live weight (e.g., CAST, LAP3, MED28, HERC6), body condition score (e.g., CDH10, TMC2, SIRPA, CPXM1) or reproduction traits (e.g., ADCY1, LEPR, GHR, LPAR2) of the mixed-age ewes. Copyright: © 2023 by the authors 653 $aBody condition score 653 $aFiber diameter 653 $aGene 653 $aGWAS 653 $aReproduction 653 $aSheep 700 1 $aGARRICK , D. J. 700 1 $aBLAIR, H. T. 700 1 $aVERA, B. 700 1 $aCIAPPESONI, G. 700 1 $aKENYON, P. R. 773 $tGenes, 2023, volume 14, issue 1, article 167. OPEN ACCESS. doi: https://doi.org/10.3390/genes14010167
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